BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036D10LP1|AL430226
(941 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig794 1793 0.0
>3x_Contig794
Length = 3106
Score = 1793 bits (902), Expect = 0.0
Identities = 931/942 (98%), Gaps = 1/942 (0%)
Strand = Plus / Minus
Query: 1 ggcattgcaccacttgaaggtagatcatccaatccgtggtagtggcccaaactgtaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 ggcattgcaccacttgaaggtagatcatccaatccgtggtagtggcccaaactgtaaaat 2102
Query: 61 cactgagttagactgtaagaatgcaaggcaaagactgaccctgactgcaggaatgtgtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 cactgagttagactgtaagaatgcaaggcaaagactgaccctgactgcaggaatgtgtac 2042
Query: 121 tttagtcggtagacctgaaccaaattacgataatttggaggcacaagcacaacatttcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 tttagtcggtagacctgaaccaaattacgataatttggaggcacaagcacaacatttcaa 1982
Query: 181 cgaaggaattgaaactatcgaaaaagatgatcaaaagaaccaatctgccatcaataacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 cgaaggaattgaaactatcgaaaaagatgatcaaaagaaccaatctgccatcaataacat 1922
Query: 241 cagtacctggattcaagagatctcttcttcggtgcaagckataattcacggaagaactcc 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1921 cagtacctggattcaagagatctcttcttcggtgcaagctataattcacggaagaactcc 1862
Query: 301 ttcaatgggcctcgaaatggataaatgggaatctggtatcggtctagaaccagaagtcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 ttcaatgggcctcgaaatggataaatgggaatctggtatcggtctagaaccagaagtcag 1802
Query: 361 agactttatcatatcttggaaaaacagaagaaacttcgataattcttcttacaataccgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 agactttatcatatcttggaaaaacagaagaaacttcgataattcttcttacaataccgc 1742
Query: 421 ag-atactccaacggtattcaaatctcttcttcagcaacctatagaaacaacgctcgtgc 479
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 aggatactccaacggtattcaaatctcttcttcagcaacctatagaaacaacgctcgtgc 1682
Query: 480 gcctgaagaaaaagactcgtactcaagtttccaaacacctgaagaaagatctgcatatgt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 gcctgaagaaaaagactcgtactcaagtttccaaacacctgaagaaagatctgcatatgt 1622
Query: 540 caaagaacaagctaaaaagaagatggaagaraaattggcagccttaggaatcaaaaagaa 599
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 1621 caaagaacaagctaaaaagaagatggaagaaaaattggcagcattaggaatcaaaaagaa 1562
Query: 600 atcagggagttcacaatcatcacctaatcctccacaattgactcagcaacaacagcctca 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1561 atcagggagttcacaatcatcacctaatcctccacaattgactcagcaacaacagcttca 1502
Query: 660 acagcagcagccgccgccgcagcagcagcagcaacagcagcaacagcaacctaactatta 719
||||||||||| || || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1501 acagcagcagcagcagcagcagcagcagcagcaacagcagcaacagcaacttaactatta 1442
Query: 720 ccaamaacccagtcaacctgctgctgcggtaaacaactccaatctaccaaaagctaacga 779
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 ccaacaacccagtcaacctgctgctgcggtaaacaactccaatctaccaaaagctaacga 1382
Query: 780 cgatgatgatgaagatgaggaggacgaggaggagagaagattgttagaacaattagaaaa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 cgatgatgatgaagatgaggaggacgaggaggagagaagattgttagaacaattagaaaa 1322
Query: 840 actgaaactgaagaaaaaacaagaaaaagaagctagattagcagccaagcgtcaaaccag 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 actgaaactgaagaaaaaacaagaaaaagaagctagattagcagccaagcgtcaaaccag 1262
Query: 900 ctcatcaccagcmgaaactaagaatgataacggtcatgactc 941
|||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1261 ctcatcaccagcagaaactaagaatgataacggtcatgactc 1220
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,585
Number of Sequences: 1807
Number of extensions: 10585
Number of successful extensions: 555
Number of sequences better than 1.0e-20: 1
length of query: 941
length of database: 10,358,551
effective HSP length: 16
effective length of query: 925
effective length of database: 10,329,639
effective search space: 9554916075
effective search space used: 9554916075
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)